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BioNLP 2007

More information at WS5 workshop page. (try the local copy if the link doesn't work)

Accepted papers

  • Beatrice Alex, Barry Haddow, and Claire Grover: Recognising nested named entities in biomedical text
  • Alan R. Aronson, Olivier Bodenreider, Dina Demner-Fushman, Kin Wah Fung, Vivian K. Lee, James G. Mork, Aurelie Neveol, Lee Peters, and Willie J. Rogers: From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches
  • Wendy Chapman, John Dowling, and David Chu: ConText: an algorithm for identifying contextual features from text
  • Peter Corbett, Colin Batchelor, and Simone Teufel: Annotation of chemical named entities
  • Son Doan, Ai Kawazoe, and Nigel Collier: The role of roles in classifying annotated biomedical text
  • Noemie Elhadad and Komal Sutaria: Mining a lexicon of technical terms and lay equivalents
  • Marti Hearst, Anna Divoli, Michael Wooldridge, and Jerry Lee: Exploring the efficacy of caption search for bioscience journal search interfaces
  • Haibin Liu, Christian Blouin, and Vlado Keselj: An unsupervised method for extracting domain-specific affixes in biological literature
  • Amgad Madkour, Kareem Darwish, Hany Hassan, Ahmed Hassan, and Ossama Emam: BioNoculars: extracting protein-protein interactions from biomedical text
  • Bridget McInnes, Ted Pedersen, and Serguei Pakhomov: Determining the syntactic structure of medical terms in clinical notes
  • John P. Pestian, Chris Brew, Pawel Matykiewicz, DJ Hovermale, Neil Johnson, K. Bretonnel Cohen, and Wlodzislaw Duch: A shared task involving multi-label classification of clinical free text
  • Sampo Pyysalo, Filip Ginter, Veronika Laippala, Katri Haverinen, Juho Heimonen, and Tapio Salakoski: On the unification of syntactic annotations under the Stanford dependency format: a case study on BioInfer and GENIA
  • Brian Roark, Margaret Mitchell, and Kristy Hollingshead: Syntactic complexity measures for detecting Mild Cognitive Impairment
  • Hua Xu, Jen-Wei Fan, and Carol Friedman: Combining multiple evidence for gene symbol disambiguation

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Organized by:

ACL UFAL

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